Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQQFQTIALIGIGLIGSSIARDIREKQLAGTIVVTTRSEATLKRAGELGL-------------GDRYTLSAAEAVEGADLVVVSVPVGASGAVAAEIAAHLKPGAIVTDVGSTKGSVIAQMAPHLPKDVH----FVPGHPIAGTEHSGPDAGFAGLFRGRWCILTPPAGTDEEAVARLRLFWETLGSMVDEMDPKHHDKVLAIV----SHLPHIIAYNI-VGTADDLETVT------ESEVIKYSASGFRDFTRLAAS-----------DPTMWRDVCLHNKD-------------AILEMLARFSEDLASLQRAIRWG-DGDKLFDLFTRTRAIR-RSIVQAGQ-------DTAMPDFGRHAMDQK |
| 1BG6 Chain:? ((4-359)) | ----SKTYAVLGLGNGGHAFAAYLALKGQ--SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVPAIHHASIAANIASYISEGQLIILNPGATGGALEFRKILRENGAPEVTIGETSSMLFTCRSERPGQVTVNAIKGAMDFACL----PAAKAGWALEQIGSVLPQYVAVE-----NVLHTSLTNVNAVMHPLPTLLNAARCESGTPFQYYLEGITPSVGSLAEKVDAERIAIAKAFDLNVPSVCEWYPATIYEAVQGNPAYRGIAGPINLNTRYFFEDVSTGLVPLSELGRAV--NVPTPLIDAVLDLISSLIDTDFRKEGRTLEKLGLSGLTAAGIRSAVE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156822 for 2335 contacts (-67.2/contact) +
2D Compatibility (PS) -31541 + (NN) -13978 + (LL) 824
1D Compatibility (HY) -4000 + (ID) 2000
Total energy: -207517.0 ( -88.87 by residue)
QMean score : 0.377
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