Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------MDSLVKIMGSFLALSLIMIFSSCIVNEHVDEGNI-KENAVRMMECIVNKDSEKLF----DFYNKDMKDNYKDSSLDE-IR--QLFEYIDGAITSYNYEGKGG--------------------GQEAKNDGIICYYSCHPEFDFTTETGQEYTISFSYHYIWNEHPEYEGINMIQICKDGNWGEKLIIGRNYYKE-- |
1HF2 Chain:A ((1-206)) | MVDFKMTKEGLVLLIKDYQNLEEVLNAISARITQMGGFFAKGDRISLMIENHNKHSQDIPRIVSHLRNLGLEVSQILVGKVQSRTTVES-TGKVIKRNIRSGQTV-VHSGDVIVFGNVNKGAEILAGGSVVVFGKAQGNIRAGLNEGGQAVVAALDLQTSL-----------IQIAGFIT--HSKGEENVPSIAHVKGN----RIVIEP-FDKVSF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22684 for 890 contacts (-25.5/contact) +
2D Compatibility (PS) -15753 + (NN) -8715 + (LL) 712
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -50090.0 ( -56.28 by residue)
QMean score : 0.224
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