Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AARYDDVLYFPASRYPETGAHISDAIKAGHADVC--TIERSGADKRRQESLKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSD-----NRGAG-----SWVGNRLNGYADGTRILFIVQ
3CVZ Chain:A ((4-85))
---GTQGYTVVKNDWKKAVKQLQDGLKDNSIGKITVSFNDG------------------------------------VVGEVAPKSANKKADRDAAAEKLYNLVNTQLDKLGDGDYVDFSV-
General information:
TITO was launched using:
RESULT:
Template:
3CVZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35019 for 369 contacts (-94.9/contact) +
2D Compatibility (PS) -7395 + (NN) -813 + (LL) 1516
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -45911.0 ( -124.42 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_3CVZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CVZ-query.scw
PDB file :
Tito_Scwrl_3CVZ.pdb
: