Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGLLSNFRNTIIVSFVLALVIVIGYGHSPHGHDATYFQAIFRWLHVLFGILWIGLLYYFNFVQIRVMPQIPAELKPAVSKYIAPEALFWFRWAALATWVMGVLLAYNRGYLVEAFTLGLAGGYTPGVDMGFTFIGTGMWLATVMFFNVWVFIWPNQKIALGIVEADADAKAKAAKTAMLVSRTNTLLSIPMLATMAMHQTLFG |
| 4C7R Chain:A ((64-108)) | -----------------------------------SAVVDNLGWAFILFGTVFVFFIVVIAASKFGTIRLGRIDEAPEFR---------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4C7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -14752 for 172 contacts (-85.8/contact) +
2D Compatibility (PS) -4253 + (NN) -1346 + (LL) 13368
1D Compatibility (HY) -3200 + (ID) 250
Total energy: -10433.0 ( -60.66 by residue)
QMean score : 0.040
|
|
|