Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------MKKVLLLVFLSLTWLSASAQALVPITWTAYGLTFEAPKGILVEE-DTEETFLLNNSRFYITIQSLDSDGMTKSDLKSVLKDYANDDGVK-DQSAVQEFELPQFFG-TYLKGSCETD--HCLYACLMTKAAGSGFYISIIYSKENENIAEKILKSFTMEE |
| 1KCW Chain:? ((347-553)) | IRGKHVRHYYIAAEEIIWNYAPSGIDIFTKENLTAPGSDSAVFFEQGTTRIGGSYKKL---VYREYT--DASFTNRKERGPEEEHLGILGPV-IWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVD--PTKDIFTGLIGPMKICKKGSLHANGRQK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15454 for 930 contacts (-16.6/contact) +
2D Compatibility (PS) -14443 + (NN) 1993 + (LL) 1492
1D Compatibility (HY) 400 + (ID) 1300
Total energy: -27312.0 ( -29.37 by residue)
QMean score : 0.079
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