Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
PYLKEKSSATVY--FQTV-KHNNIRDLVRRCITRTSQVLVILMDVFT-DVEIFCDILEAANKRGVFVCVLLDQGGV-----------------KLFQEMCDKVQ---IS-DSHLKNISIRSVEGEIYCAKSGRKFAGQIREKFIISDWRFVLSGSYSFTWLCGHVHRNILSKFTGQ---AVELFDEEFRHLYASSKPVMGLKSP
3HSI Chain:A ((239-421))
------NVLSVSPLFGLGASGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLL-ENGKRVEIIVGDKVANDFYIPPEQPFKMAGALPYLYESNLRRFCEKFETQIESGQLVVRLWR------D----GDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQQQLLAQVEKEQNQIRQHTKVLKH----
General information:
TITO was launched using:
RESULT:
Template:
3HSI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79074 for 1060 contacts (-74.6/contact) +
2D Compatibility (PS) -17205 + (NN) -9762 + (LL) 712
1D Compatibility (HY) -400 + (ID) 900
Total energy: -106629.0 ( -100.59 by residue)
QMean score : 0.245
(partial model without unconserved sides chains):
PDB file :
Tito_3HSI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HSI-query.scw
PDB file :
Tito_Scwrl_3HSI.pdb
: