Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------MFQKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEKSSDIAQVKIKDVSYTLPSKYDKSTSDDQLVLKV--------------------NVAVKNTGKDPLNVDSMDFTLYQG-----------------DTKMSDTDPEDYSEKLQGSTINADKSVEGNL------FFVVDKGKQYELN--YTPESYGDKKPKSV----TFKIDGKDKKILATADKLQDSAKALSAYVDVLLFGKDNADFEKITGANKNE---IVNDFNESAKDGYLSASGLSSTYADSKALDNI--VNGIKEGLSKNSSIQA------KTTSISKDE-----AIVEATVKPVDASSLSDRIEDKVKDYYSKNS---SASYEE---------AVKYALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDY---RAAELVEAFIKE |
| 3W36 Chain:A ((58-527)) | IEFDLDKDNYIKWAQPTDENAGQSPTLAILGPMDVTVFLWINRVVWLAAFDALAPYHETAVGVYSQIPRRPSSESATNRNLNIAALHAQHGVWKRVLPQQVDQLRELMTALGLDPSDETENLSSPVGIGNVAAKN-AFNALKNDGMNFLGYEGRKYNPRPWADYTGYEPVNTAFKVNNPSRWQPQLQAHNARRAGGGPGDLGIYVTQHFVTPQTARTKAHIFRDPSRFRIPRPEFSDHTNTRAYKRSVDEIIDASANLNDERKALAEIMENKLWGIGHSSIVIANKYDQNNEMGVHGWCHWMLAHVLATFEPLIAAWHHKTRFDAVRPVTAIRHVYG-NRKIRAWGGVGMGTVDIRASEWSSYLPVGDHPEYPSGSTSLCSATSQAARRYFDSDELDWTINYPAGSTVVEPGITPGKDLSIHIPTWTDFTRTCATSRVWGGVHFQTTVDRTIDFGEQFGDLAHEFVQRHVKG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3W36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 102916 for 2719 contacts (37.9/contact) +
2D Compatibility (PS) -36111 + (NN) -3648 + (LL) 116
1D Compatibility (HY) -6800 + (ID) 2900
Total energy: 53573.0 ( 19.70 by residue)
QMean score : 0.113
|
|
|