Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ATMAFHPMLCRLELSVSAAPPASPIDATLLRSLITSVLNSSWVDLGGNTANEKVLCAIGLIEAFCRERVIPPTSNSFNTSVTYHIMVEDLDPDDLGNIQLINKPLLS---LEGDLKVLGSYQLTFQTIPGH--SEPRSMTDNGIYHSDSPFFQIALGHALLGTGKIYDHITRALRVAPITIAPEKRKEPLSSYMV |
1FNF Chain:? ((1142-1235)) | -------------------PLSPPTNLHLEANPDTGVLTVSWE---------------------------RSTTPDIT---GYRITTTPTNGQQGNSLEEVVHADQSSCTFDN-LSPGLEYNVSVYTVKDDKESVPISDT----IIPA----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14381 for 616 contacts (-23.3/contact) +
2D Compatibility (PS) -9990 + (NN) -8898 + (LL) 7584
1D Compatibility (HY) -400 + (ID) 950
Total energy: -27035.0 ( -43.89 by residue)
QMean score : 0.221
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