Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAEARVSRWYFGGLASCGAACCTHPLDLLKVHLQTQQ-------EVKLR-MTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKG----SQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLM------NSKGEYQGVFHCAVETAKL-GPLAFYKGLVPAGIRLIPHTVLTFVFLEQLRKNFGIKVPS |
| 1OKC Chain:A ((2-293)) | DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQRE-FTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK--NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81874 for 1950 contacts (-42.0/contact) +
2D Compatibility (PS) -27519 + (NN) 4434 + (LL) 700
1D Compatibility (HY) -13600 + (ID) 2900
Total energy: -120759.0 ( -61.93 by residue)
QMean score : 0.256
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