Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSEGY-----FGMY---RGAAVN---LTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKE-----MLAGCGAGTCQVIVTTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQL-TRDLLRSRGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEE------KSPFYVS---FLAGC------VAGSAAAVAVN------PCDVV-----KTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLK-GAYCRALVIAPLFGIAQVVYFLGIAESLLG-LLQDPQA------- |
| 1ZY7 Chain:A ((8-402)) | SRQPIPSEGLQLHLPQVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDVKDAKVISVSTGTKCINGEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQKRSIFQKSERGGFRLKENVQFHLYISTSPCGDARI-FKARGQL--RTKIESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLYHGDHLSRAMYQRISNIEDLPPLYTLNKPLLSGISNAEARQPGKAPNFSVNWTVGDSAIEVINATTGKDELGRASRLCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLAAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89234 for 2531 contacts (-35.3/contact) +
2D Compatibility (PS) -32131 + (NN) 8441 + (LL) 408
1D Compatibility (HY) -10000 + (ID) 3000
Total energy: -125516.0 ( -49.59 by residue)
QMean score : 0.215
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