Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQEPLLGAEGPDYDTFPEKPPPSPGDRARVGTLQNKRVFLATFAAVLGNFSFGYALVYTSPVIPALERSLDPDLHLTKSQASWFGSVFTLGAAAGGLSAMILNDLLGRKLSIMFSAVPSAAGYALMAGAHGLWMLLLGRTLTGFAGGLTAACIPVYVSEIAPPGVRGALGATPQLMAVFGSLSLYALGLLLPWRWLAVAGEAPVLIMILLLSFMPNSPRFLLSRGRDEEALRALAWLRGTDVDVHWEFEQIQDNVRRQSSRVSWAEARAPHVCRPITVALLMRLLQQLTGITPILVYLQSIFDSTAVLLPPKDDAAIVGAVRLLSVLIAALTMDLAGRKVLLFVSAAIM----FAANLTLGLYIHFGPRPLSPNSTAGLESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGYAVGWGPITWLLMSEVLPLRARGVASGLCVLASWLTAFVLTKSFLPVVSTFGLQVPFFFFAA-ICLVSLVFTGCCVPETKGRSLEQIESFFRTGRRSFLR-------- |
4WW4 Chain:A ((3-458)) | ------------------QISEVRGNT------RDHRTAAHTHIKGLGLNSSGIA---------------------EKQAAGFVGQ-----CAAREACGVVVDLIKAHKM---------AGRGVLLAGGPGTGKTALALAISQELGTKIP-FCPITGSEIYSTEVK----KTEVLMENFRR----AIGLRVRETKDVYEGEVSTLLIGL------KSARGQKLDQKERVQVGDVIYIETNTGACR--SDAYATEFDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDVANARPDIISMMGQLMKPK---MTEITDKLRMEINKVVQKYINQGVAELIPG--VLFIDEAHMLDIECFTYLNKALESPIAPIVVLASNRGIATIRGADDLKAAHGIPPDFLQRLLIIPT-----------HPYEPDEIRRIVRIRAQTEGVQL------------TDAAVDRVAEHGVRISLRYCLQLLAPASILARVNGRTQVDVQDIAEAEELFLDARRSANILTSTGGLH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238832 for 3033 contacts (-78.7/contact) +
2D Compatibility (PS) -41356 + (NN) -9724 + (LL) 8224
1D Compatibility (HY) -7200 + (ID) 3550
Total energy: -292438.0 ( -96.42 by residue)
QMean score : 0.174
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