Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGLRGFYKGTGPALMAYVAENSVLFMC------YGFCQQFVRKVAGMDKQAKLSDLQTAAAGSFASAFAALALCPTELVKCRLQTMYEMEMSG---------KIAKSHNTIWSVVKGILKKDGPLGFY---------------HGLSSTLLQEVPGYFFFFGGYELSRSFFASGRSKDELGPVHLMLS---GGVAGICLWLVVFPVDCI--KSRIQVLSMYGKQAGFIGTLL--SVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSR------------KMMMKQLEAY------ |
| 2PV0 Chain:A ((34-380)) | ---GRDLIAYEVKANQRNIEDICICCGSL-----QVHTQHPLFEGGICAPCKDKFLDALFL-YDDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLKAFYDRESENPLEMFETVPVWRRQPVRVLSLFEDIKKELTSLGFLESGSDPGQLKHVVDVTDTVRKDVEEWGPFDLVYGATPPLGHTCDRPPSWYLFQFHRLLQYARPKPGSPGPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRSRHWALVSEEELSLLAQNKQSSKLAAKWPTKLVKNCFLPLREYFKYFST |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171475 for 2116 contacts (-81.0/contact) +
2D Compatibility (PS) -30461 + (NN) 2460 + (LL) 448
1D Compatibility (HY) -12000 + (ID) 1600
Total energy: -212628.0 ( -100.49 by residue)
QMean score : ?
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