Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSLPTSDGFNHPARSSGQSPDVGNPMSLARSVSASVCPIKPSDSDRIEPKAVKALKASAEFQLNSEKKEHLSLQDLSDHASSADHAPTDQSPAMPMQNSSEEITVAGNLEKSAERSTQGLKFHLHTRQEASLS-VTSTRMHEPQMFLGEKDWHPENQNLSQVSDPQQHEEPGNEQYEVAQQKASHDQEYLCNIGDLELPEERQQNQHKIVDLEATMKGNGLPQNVDPPSAKKSIPSSECSGCSNSETFMEIDTAQQSLVTLLNSTGRQNANVKNIGALDLTLDNPLMEVETSKCNPSSEILNDSISTQDLQPPETNVEIPGTNKEYGHYSSPSLCGSCQPSVESAEESCPSITAALKELHELLVVSSKPASENTSEEVICQSETIAEGQTSIK---DLSERWTQNEHLTQNEQCPQVSFHQAISVSV-----ETEKLTGTSSDTGREAVENVNFRSLGDGLSTDKEGVPKSRESINK-NRSVTVTSAKTSNQLHCTLGVEISPKLLAGEEDALNQTSEQTKSLSSNFILVKDLGQGIQNSVTDRPETRENVCPDASRPLLEYEPPTSHPSSSPAILPPLIFPATDIDRILRAGFTLQEALGALHRVGGNADLALLVLLAKNIVVPT |
| 3LGD Chain:A ((3-484)) | -----SIDETRAHLLLKEKMMRLGGRLVL----------------NTKEELANERLMTLKIAEMKEAMRTL------------------IFPPSMHFFQAKHLIE-RSQVFNILRMMPKGAALHLHDIGIVTMDWLVRNVTYRPHCHICF---TPRGIMQFRFAHPTPRPSEKCSKWILLEDYRK--------------RVQNVTEFDDSLLRNFTLVTQHPEVIYT----------------NQNVVWSKFETIFFTISGLIH----------YAPVFRDYVFRSMQEFYE-----------DNVLYMEIRARLLPV----YELSGEHHDEEWSVKTYQEVAQKFVETHPEFIG-----IKIIYSDHRSKDVAVIAESIRMAMGLRIKFPTVVAGFDLVGHEDTGHSLHDYKEALMIPAKDGVKLPYFFHAGETDW-QGTSIDRNILDALMLNTTRIGHGFALSKH--PAVRTYSWKKDIPIEVC--------------PISNQVLKLVSDLRNHPVATLMATGHPMVIS-----------SDDPAMFG--AKGLSYDFYEVFMGIGGMKADLRTLKQLAMNSIK-----YSTLLESEKNTFMEIWKKRWDKFIADVAT------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LGD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 132250 for 3890 contacts (34.0/contact) +
2D Compatibility (PS) -50136 + (NN) -12833 + (LL) 6380
1D Compatibility (HY) -11200 + (ID) 2900
Total energy: 61561.0 ( 15.83 by residue)
QMean score : 0.090
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