Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFQDLLGHAGDLWRFQILQTVFLSIFAVATYLHFMLENFTAFIPGHRCWVHILDNDTVSDNDTGALSQDALLRISIPLDSNMRPEKCRRFVHPQWQLLHLNGTFPNTSDADMEPCVDGWVYDRISFSSTIVTEWDLVCDSQSLTSVAKFVFMAGMMVGGILGGHLSDRFGRRFVLRWCYLQVAIVGTCAALAPTFLIYCSLRFLSGIAAMSLITNTIMLIAEWATHRFQA-MGITLGMCPSGIAFMTLAGLAFAIRDWHILQLVVSVPYFVIFLTSSWLLES--ARWLIINNKPEEGLKELRKAAHRSGMKNARDTLTL---EILKSTMKKELEAAQKKKPSLCEMLHMPNICKRISLLSFTRFA--NFMAYFGLNL-HVQHLGNNVFLLQTL-FGAVILLANCVAPWALKYMNRRASQMLLMFLLAICLLAIIFVPQEMQTLREVLATLGLGASALANT---LAFAHGNEVIPTIIRARAMGINATFANIAGALA----PLM----MILSVYSPPLPWIIYGVFPFISGFAFL-LLPETRNKPLFDTIQDEKNERKDPREPKQEDPRVEVTQF |
| 4QIQ Chain:A ((7-470)) | --------------------SYIFSITLVATLGGLLFGYDTAVISG---------------------TVESLNTV---------------FVAPQ-------NLSESAANSLLGFCV--------------------------------ASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSA-------WPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTD-----GWRYMFASECIPALLFLMLLYTVPESPRWLMTLATQAVQEIKHSLDRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -345251 for 3312 contacts (-104.2/contact) +
2D Compatibility (PS) -43060 + (NN) -10837 + (LL) 8628
1D Compatibility (HY) -32000 + (ID) 4450
Total energy: -426970.0 ( -128.92 by residue)
QMean score : 0.234
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