Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQEARVLRAAGGFGRARRLLASASWVPCIVLGLVLSSEELLTAQPAPHCRPDPTLLPPALRALRGPAL----LDAAIPRLGPTRAPAEALGVLSPSYLAPLTR--APRPSSWASCSGAAAGPTWNLVCGDGWKVPLEQVSHLLGWLL-GCVILGAGCDRFGRRAVFVASLVLTTGLGASEALAASFPTLLVLRLLHGGTLAGALLALYLARLELCDPPHRLAFSMGA-GLFSVVGTLLLPGLAALVQDWRLLQGLGALMSGLLLLFWGFPALFPESPCWLLATGQVARARKILWRFAEASGVGPGDSSLEENSLATATELTMLSARSPQPRYHSPLGLLRTRVTWRNGLILGFSSLVGGGIRASFRRSLAPQVPTFYLPYFLEAGLEAAALVFLLLTADCCGRRPVLLLGTMVTGLASLLLLAG-----AQYLP-GWTVLFLSVLGLLASRAVSALSSLFAAEVFPTVIRGAGLGLVLGAGFLGQAAGPLDTLHGRQGFFLQQVVFASLAVLALLCVLLLPESRSRGLPQSLQDADRLRRSPLLRGRPRQDHLPLLPPSNSYWAGHTPEQH |
| 4U6D Chain:A ((28-409)) | -------------EGFPFILPKEKPNRP-------LSAAMQRNYDNYMAPRPENNELYTQFKYTELKGFDYNGHDGTISRRDPSKVIYEN----GKYYVWYTYRNTPTPPQGAKNSNDTIPSADWDLA-----EIWYATSKDGFTWEEQGVAVPRPPKPNVGWRSVTTTDILKWKG---------------KFYLYYQGFMEAS-------GTRGDDCPVAVSYADSPDGPWTPHTEVVIPNGKKGEWDQYSIHD-------------PYPIVYKD--------------KIYLYYKSDFDG---DPNLVRMQGLAIA---------------DNPLG--------------------------PFKKSPLNPV--------INSGHETTLFPFK-------------------EGMAALVIRDGTEHNTVQYAEDGVNFNIASIVEFMPNAAGPYVADAFTNTKY-------GRGISWGISHF-TNATTWDQNH------------AVLARFDCDLSLDVDDPHMKRLGTYFKPEFYYQMGLSKKQRERI--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222224 for 3033 contacts (-73.3/contact) +
2D Compatibility (PS) -37042 + (NN) 8737 + (LL) 12920
1D Compatibility (HY) -5200 + (ID) 3450
Total energy: -246259.0 ( -81.19 by residue)
QMean score : 0.077
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