Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFLMSGLAACGACVFTNPLEVVKTRMQLQGELQAPGTYQRHYRNVFHAFITIGKVDGLAALQKGLAPALLYQFLMNGIRLGTYGLAEAGGYLHTAEGTHSPARSAAAGAMAGVMGAYLGSPIY-----MVKTHLQAQAASEIAVGHQYKHQGMFQALTEIGQKHG------LVGLWRGALGGLPRVIVGSST-QLCTFSSTKDLLSQWEIFPPQSWKLALVAAMMSGIAVVLAMAPFDVACTRLYNQPTDAQGKGLMYRGILDALLQTARTEGIFGMYKGIGASYFRLGPHTILSLFFWDQLRSLYYTDTK |
1V74 Chain:A ((1-107)) | ----------------------------------------------------------------------------------------------------------------------LNDPLDSGRFSRKQLDKKYKHAGDFGISDTKKNRETLTKFRDAIEEHLSDKDTVEKGTYRREKG--SKVYFNPNTMNVVIIKSNGEFLSGWKINPDADNGRIYLETGEL------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V74.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34687 for 618 contacts (-56.1/contact) +
2D Compatibility (PS) -10020 + (NN) -4009 + (LL) 14024
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -36692.0 ( -59.37 by residue)
QMean score : 0.172
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