Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELRSTAAPRAEGYSNVGFQNEENFLENENTSGNNSIRSRAVQSREHTNTKQDEEQVTVEQDSPR--------------------NREHMEDDDEEMQQKGCLERR--------------------YDTVCGFCRKHKTTLRHIIWGILLAGYLVMVISACVLNFHRA-LPLFVITVAAIFFV------VWDHLMAKYEHRIDEMLSPGRRLLNSHWFWLKWVIWSSLVLAVIFWLAFDTAKLGQQQLVSFGGLIMYIVLLFLFSKYPTRVYWRPVLWGIGLQFLLGLLILRTDPGFIAFDWLGRQVQTFLEYTDAGASFV----FGEKYKDHFFAF----------KVLPIVVFF--STVMSMLYYLGLMQ-----WIIRKVGWIMLVTTGSSPIESVVAS-GNIFVGQTESPLLVRPYLPYITKSELHAIMTAGFSTIAGSVLGAYISFGVP----SSHLLTASVMSAPASLAAAKLFWPETEKPKITLKNAMKMESGDSGNL------LEAATQGASSSISLVANIAVNLIAFLALLSFMNSALSWFGNMFDYPQLSFELICSYIFMPFSFMMGVEWQDSFMVARLIGY---KTFFNEFVAYEHLSKWIHLRKEGGPKFVNGVQQYISIRSEIIATYALCGFANIGSLGIVIGGLTSMAPSRKRDIASGAVRALIAGTVACFMTACIAGILSSTPVDINCHHVLENAFNSTFPGNTTKVIACCQSLL----SSTVAKGPGEVIPGGNHSLYSLKGCCTLLNPSTFNCNGISNTF |
3OC3 Chain:A ((33-800)) | --LNTAQSKVLKGYTTDELVSQIKEYVDFTPYILKQTYRLLCGQASEDRRNGARILRSLMFQFKLVTDFKIEYKESSSIYLSSTGEQFNVQAPSIQEQKRMVRKIAKLEHVEANFLSDIDFKAGSPIENVLDFFEQISDNLLSYEWYKRHGAFLAFAAMFSEIDIQIRVDSKLFSKIYEILVTDKFNDFVDDRTVAPVRDAAAYLLSRIYPLIGPNDIIEQLVGFLDSGDWQVQFSGLIALGYLKEFVEDKDGLCRKLVSLLSSPDEDIKLLSAELLCHFPITDSLDLVLEKCWKNIESEELISVSKTSNLSLLTKIYRENPELSIPPERLKDIFPCFTSPVPEVRTSILNMVKNLSEESIDFLVAEVVLIEEKDEIREMAIKLLKKRRDLPKNLILHFMNVIGGSLYEPYSEDDFVSYEDLYFTKSGINVVGKDEILKNRCLLFECIMKSGLPDLQSTIETTTSRTFISLYRSVQALVKDTPYTPANIEELEYYFDRCKDLKMAPLKEFKKKLSAPGIRSIHPMVDPLYSDYTRMVASIEF--PGLERATALFEVETCKQFLHLFSKMITEYYDAEKISIDNFLLKAYEGLASGKDGFLSFFEVFNTRLLAHSFFHKIGSLENRLDFFSKTIHIYTKTSQIQKIGFVFDDALREKNITVINGFMRSLEFNEKFVRKALEDLDVELLDAVLMSGDHSFNPLFVKPLLRNISGNIDREASSKVLSKVIPTLGFSTNTKISKDLLEMIEREKKSLESL--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OC3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -353060 for 4934 contacts (-71.6/contact) +
2D Compatibility (PS) -66579 + (NN) 11959 + (LL) 788
1D Compatibility (HY) -15600 + (ID) 3600
Total energy: -426092.0 ( -86.36 by residue)
QMean score : 0.135
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