Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MRPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSPCCSRTEPEAKKKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQDVHAVEISAFRCVFQMLVVIPCLIYRKTGFIG-PKGQRIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKEKYSPWDALFTVFTITGVILIVR--PPFLFGSDTSGMEESYSGHLKGTFAAIGSAVFAAS-----TLVILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGEWSLPYCGLDRLFLIFIGLFGLGGQIFITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFNNVPTWWTVGGAL---CVVASNVGAAIRKWYQSSK---- |
| 1QR7 Chain:A ((8-350)) | LRIKEIKELLPPVALLEK-FPATENAANTVAHARKAIHKILKGNDDR-LLVVIGPC------------------------SIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDSG-LPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRG-GKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQF-----------------KKQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLLAYGKSITDACIGWEDTDALLRQLANAVKARRG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -299175 for 2739 contacts (-109.2/contact) +
2D Compatibility (PS) -33281 + (NN) 665 + (LL) 2764
1D Compatibility (HY) -3600 + (ID) 2100
Total energy: -334727.0 ( -122.21 by residue)
QMean score : 0.251
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