Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MCF-------RTKLSVSWVPLFLLLSRVFSTETD---KPSAQDSRSRGSSGQPADLLQVLSAGDHPPHNHSRSLIKTLLE--KTGCPRRRNGMQGDCNLCFEPDALLLIAGGNFEDQLREEVVQRVSLLLLYYIIHQEEICSSKLNMSNKEYKFYLHSLLSLRQDEDSSFLSQNETEDILAFTRQYFDTSQSQCMETKTLQKKSGIVSS--EGANESTLPQLAAMIIT-LSLQGVCLGQGNLPSPDYFTEYI---------------FSSLNRTNTLRLSELDQLLNTLWTRSTCIKNEKIHQFQRKQNNIITHDQDYSNFSSSMEKESEDGPVSWDQTCFSARQLVEIFLQKGLSLISKEDFKQMSPGIIQQLLSCSCHLPKDQQAKLPPTTLEKYGYSTVAVTLLTLGSMLGTALVLFHSCEENYRLILQLFVGLAVGTLSGDALLHLIPQVLGLHKQEAPEFGHFHESKGHIWKLM------GLIGGIHGFFLIEKCFILLVSPNDKQGLSLVNGHVGHSHHLALNSELSDQAGR-GKSASTIQLKSPEDSQAAEMPIGSMTASNRKCKAISLLAIMILVGDSLHNFADGLAIGAAFSSSSES----------------GVTTTIAILCHEIPHEMGDFAVLLSSG-----LSMKTAILMNFISSLTAFMGLYIGLSVSADPCVQDWIFTVTAGMFLYLSLVEMLPEMTHVQT--QRPWMMFLLQNFG---------LILGWLSLLLLAIYEQNIKI---------------------------------------------- |
| 4A0G Chain:A ((27-831)) | PFHLPLNHPTYLIWSANTSLGKTLVSTGIAASFLLQQPSSSATKLLYLKPIQTGFPSDSDSRFVFSKLDSLSLRRQIPISISNSVLHSSLPAAKSLGLNVEVSESGMCSLNFRDEK-----------TVTGAPELLCKTLYAWEAAISPHLAAERENATVEDSVVLQMIEKCLKEEMD--LLCLVETAGGVASPGP---SGTLQCDLYRPFRLPGILVGDGRLGGISGTIAAYESLKLRGYDIAAVVFEDHGLVNEVPLTSYLRNKVPVLVLPPVPKDPSDDLIEWFVESDGVFKALKETMVLANLERLERLNGMAKLAGEVFWWPFTQHKLVHQETVTVIDSRCGENFSIYKASDN--SSLSQQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMFPENVYEPALKCAELLLDGVGK--GWASRVYFS--DNGSTAIEIALKMAFRKFCVDHN-FIVVKVIALR-------GSYH---GDTLGAMEAQAPSPYTGFLQQPWYTGRGLFL-----DPPTVFLSNG----SWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELL--GCKPDIACFAKLLTGGMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSA----HAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALELKSLYAKSLLIMLREDGIFTRPLGNVIYLMCGPCTSPEICRRLLTKLYKRLGEFNRT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124379 for 4834 contacts (-25.7/contact) +
2D Compatibility (PS) -64733 + (NN) 12733 + (LL) 2748
1D Compatibility (HY) -16800 + (ID) 5450
Total energy: -195881.0 ( -40.52 by residue)
QMean score : 0.094
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