Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLGTITAVVKTEGRMKLYSGLPAGLQRQIS-SASLRIGLYDTVQEFLTAGKETAPSLGSK----ILAGLTTG-GVAVFIG-QPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATT-EGLTGLWKGTTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCAT-AMSSPVDVVKTRFINSPPGQYKSVPN-CAMKV-FTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRELSKSRQTMDCAT-------------------- |
2P7N Chain:A ((47-392)) | PALAAARAKADELGQAAREVRASVERQTAYETRLAAQRSAAAFSGGEPPARREAPGAELDE-ARNAQTVSARLFEGNLKGVAQSGHAMSAEQKQALQSGLDDVFADAPPQARSAGAPMLYSANAAAGQGMADSDLWDMISDQIGKIKDNYLGVYENVVGQYTDFYKAFSDILSQMANWIKLNVDALKAALEKLKKDFSLGDNLDNKKAVLFPAQSKDGGIQGGS-ESDARKWAKEMGLPDAPPPGFSCVQKAADGNWVVVVDMTPIDTMIRDVGALGS-GTLELDNAKFQAWQSGFKAQEENLKNTLQTLTQKYSNANSLFDNLVKVLSSTISSCLET |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P7N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49088 for 2251 contacts (-21.8/contact) +
2D Compatibility (PS) -30429 + (NN) 8755 + (LL) 528
1D Compatibility (HY) 23200 + (ID) 1000
Total energy: -48034.0 ( -21.34 by residue)
QMean score : -0.033
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