Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQRDTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYISEVQLNTMAGASVNRV-VSPGPLHCLKVILEKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSNCKEKLNDVFDPDSTQVHMISAAMAGF----TAITATNPIWLIKTRLQLDARNRGERRMGAFECVRKVYQTDGLKGFYRGM-----------------------SASYAGISETVIHFVIYESIKQKLLEYKTASTMENDEESVKEASDFVGMMLAAATSKTCATTIAY-------PHEVVRTRLREEGTKYRSFFQTLSLLVQEEGYGSLYR--GLTTHLVRQIPNTAIMMATYELVVYLLNG--- |
| 1MLD Chain:A ((1-313)) | -------AKVAVLGASGGIGQPLSLLLKN-SP--LVSRLTLYDIA----HTPGVAADLSHI--ETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR--------KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFGV-TTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCT----PK-VDFP----QDQLS-TLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQET--DCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIKKGEEFV-KNM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MLD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125211 for 2213 contacts (-56.6/contact) +
2D Compatibility (PS) -29117 + (NN) -2066 + (LL) 3080
1D Compatibility (HY) 1200 + (ID) 1950
Total energy: -154064.0 ( -69.62 by residue)
QMean score : 0.224
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