Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVKSLLMVMATLTIAGCSQNEMTEMNPDTNRTIGLDVYTE-----VQTRGTET---TTSTLKANAGFGIFAYQTSSAGWNSEKGNTTPNFMYNEHATWTSDSWGYTNLRFWPIDDKKITFFAYAPYESKPEVGTDQKITLSGQNAKGAPTITFEVKTSNNWKDMIDLVTDCHTAIQDQTNESNKGTVQFKFSHVLTQIANIKVKPDVNLGTDTKIFVTGLKLDPGSTTLYNKAVYKFDNDTWEAISPDASYFSTEQDLSDFLNKTTTDQWGYNKSSINVSDDQNATALFSDTEALYFIPVNNKNGTTNAGDLKLKINYDIVTKVTDTSNLTSTITNKEVSLPKNTFKKGTKHTYVLTIKMNAIKITVEDNMEGWTDDSDSDINVEK |
| 4DGU Chain:A ((12-173)) | ---------------------------------TNFSISIDDALSDPLTRTSNDLFPARNSITTGEVISMAA--SGQ---------------DYTPFIV-G--KDSRAWNEIGTATGTVTFYAHYPALTDEAA-----------T-----NKRY-LK-----G-GQEHLFGTAE----A--APGSQNVSLKFKRMTVPVIILDENDRPYE--GEAKVELSLK---------NEGTQDLLNGTIEINENALS---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DGU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34792 for 937 contacts (-37.1/contact) +
2D Compatibility (PS) -16341 + (NN) -6501 + (LL) 10572
1D Compatibility (HY) 800 + (ID) 900
Total energy: -47162.0 ( -50.33 by residue)
QMean score : 0.077
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