Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALSLCVLFTLASVVSGHVAHPSLGRGDGFPFLWDNAASTLDQLN------------GTDTTIILNGFNYLDRLSMFKTVLE---GTRKYFDSFAPNNTANIYWGFTIYLNWILATGRSADPTGHTTCGLAHGDPMCLAEESWWNCIKYNPAAIAFFAAKKAGIFGDVTKTIVLAKPKEANSP----------------------------YCSSEEECQAAYPDVMATYLDYFEYLMSLEKTGESIDMDKAQQLLWKAHV-----------------------------TSMENSIAVCK-------------PRLKNYNIIERQLDRDYLISLLYFAATNFPTN-----FIESIKFVADMPHRQL-RFGDIAPFIPDMDMKKNNLLVVLHGFY--------------------TVHSLSGGSSLTHWRNLMES-PVSREMARDM-----VNLILAGTPVEVQVELAKLGIPTPVDYKDDDK-------------------------- |
3L4G Chain:C ((1-508)) | MADGQVAELLLRRLEASDGGLDSAELAAELGMEHQAVVGAVKSLQALGEVIEAELRSTKHWELTAEGEEIAREGSHEARVFRSIPPEGLAQSELMRLPSGKVGFSKAMSNKWIRVDKSAADGPRVFRVVDSMEDEVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVTLKTYWVSKGSAFSTSISKQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQGGYGSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVADHGLTLGHLMGVLREFFTKLGITQLRFKPAYNPYTEPSMEVFSYHQGLKKWVEVGNSGVFRPEMLLPMGLPENVSVIAWGLSLERPTMI-KYGINNIRELVGHKVNLQMVYDSPLCRLDAEPRPPPTQEAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115485 for 2415 contacts (-47.8/contact) +
2D Compatibility (PS) -37811 + (NN) -11109 + (LL) 144
1D Compatibility (HY) -1200 + (ID) 2450
Total energy: -167911.0 ( -69.53 by residue)
QMean score : 0.219
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