Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNSLYIISSLFFACVLFVYATATNFQNSTSARQVKTETYTNTVTNVPIDIRYNSDKYFISGFASEVSVVLTGANRLSLASEMQESTRKFKVTADLTDAGVGTIEVPLSIEDLPNGLTAVATPQKITVKIGKKAQKDKVKIVPEIDPSQIDSRVQIENVMVSDKEVSITSDQETLDRIDKIIAVLPTSERITGNYSGSVPLQAIDRNGVVLPAVITPFDTIMKVTTKPVAPSSSTSNSSTSSSSETSSSTKATSSKTN |
| 2KXY Chain:A ((6-90)) | -------------------------------------------------------------------------------------------------------------------------------------KLSK-SVPVKLEL-TGDKASNVSSISYSFDRGHVTIVGSQEAMDKIDSITVPVDIS-QVTEDTSKTLELKA---EG----VTVQPSTVKVNLKVT------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KXY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -32111 for 510 contacts (-63.0/contact) +
2D Compatibility (PS) -9378 + (NN) -1908 + (LL) 10232
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -37415.0 ( -73.36 by residue)
QMean score : 0.127
|
|
|