Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDQQSTRTDITVNVDGFWMLQA---LLDIRHVAPELRCRPYVSTDSND--WLNEHPGMAVM--REQGIVVNDAVNEQVAARMKV-LAAPDLEV---VALLSRGKLLYGVIDDENQPPGSRDIPDNEF--RVVLARRGQHWVSAVRVGNDITVDDVTVSDSASIAALVMDGLESIHHADPAAINAVNVPMEEMLEATKSWQESGFNVF---SGGDLRRMGISAATVAALGQALSDPAAEVAVYARQYR------DDAKGPSASVLSLKDGSGGRIALYQQARTAGSGEAWLAICPATPQLVQVGVKTVLDTLPYGEWKTHSRV----------- |
4AV9 Chain:A ((14-338)) | ---SNPIVDYEFNQDQSCLIVSTPKSFDIYNVHPLKRIMSQEMPDAGTIRMLHRTNYIAFVSTKKELLHIWDDVKKQDITRVKLDAAVKDLFLSREFIVVSQGD-VISIFKFGN--PWNKITEDIKFGGVCEFANGLLVYSNEFNLG-QIHVTRLQTDAEQVVG----KGVLVKAHANP--VKMVRLNRKGDMVATCSQDGTLIRVFQTDNGVLVREFRRGLDRTSIIDMRWSPDGSKLAVVSDKWTLHVFEVFNDAENKRHVLKDWINSEWSICNFKLKVSKGSNDCKIAWISDTGLVIVWPNRRLADTFKLNYNDDEHVWWLQLNQRNEIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64827 for 2068 contacts (-31.3/contact) +
2D Compatibility (PS) -30404 + (NN) -5848 + (LL) 1336
1D Compatibility (HY) -17200 + (ID) 2700
Total energy: -119643.0 ( -57.85 by residue)
QMean score : 0.184
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