Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---RKVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIPVQD---PKLLDNLLTKNVKVVGE
1C8C Chain:A ((1-64))
MATVKFKYKGEEKQVDISKIKKVWRVGKMISFTYDEGGGKTGRGAVSEKDAPKELLQMLAKQ---KK-
General information:
TITO was launched using:
RESULT:
Template:
1C8C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 334 for 347 contacts (1.0/contact) +
2D Compatibility (PS) -6555 + (NN) -4039 + (LL) 552
1D Compatibility (HY) -800 + (ID) 650
Total energy: -11158.0 ( -32.16 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_1C8C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C8C-query.scw
PDB file :
Tito_Scwrl_1C8C.pdb
: