Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQQFQTIALIGIGLIGSSIARDIREKQLAGTIVVTTRSEATLKRAGELGLGDRYTL-----------SAAEAVEGADLVVVSVPVGASGAVAAEIAAHLKPGAIVTDVGST--KGSVIAQMAPHLPKDVHFVPGHPIAGTEHSGPDAGFAGLFRGRWCILTPPAGTDEEAVARLRLFWETLGSMVDEMDPKHHDKVLAIVSHLPHIIAYNIVGTADDLETVTESEVIKYSASGFRDFTRLAAS---DPTM------WRDVCLH-NKDAILEMLARFSE--DLASLQRAIRWGDGDKLFDLFTRTRAIRRSIVQAG--------------QDTAMPDFGRHAMDQK |
| 1TXG Chain:A ((1-335)) | -----MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVSTDGVLPVMSRILPYLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVA---ITGPAIAREVA-KRMPTTVVF-SSPSESSANKMKEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAINEMAELIEILGGDRETAFGLSGFGDLIATFRGGRNGMLGELLGKGLSIDEAMEELERRGV-GVVEGYKTAEKAYRLSSKINADTKLLDSIYRVLYEGLKVEEVLFELATFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TXG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115609 for 2414 contacts (-47.9/contact) +
2D Compatibility (PS) -31899 + (NN) -8851 + (LL) 624
1D Compatibility (HY) -4400 + (ID) 1750
Total energy: -161885.0 ( -67.06 by residue)
QMean score : 0.444
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