Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTSVWGKSILALVFTFMCSLAISAASPKDYLYDTKEENGKIISKVVFLQENGLLNKQVRYEFQYNENGKVSEKKAFRWDRTNDEWVPFYQITYQYDDQSGEIKTNYGMWDKKKKNFSLNVQNMIIPSTNYEEIFS |
| 2JTD Chain:A ((1-122)) | ---EEEMKRLLALSQEHK----FPTVPTKSELAVEILEKG----QVRFWMQAEKLSSNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEG---TYTFQIQDGKATGHSTLVLIGDVYKKLQKEAEF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11810 for 807 contacts (14.6/contact) +
2D Compatibility (PS) -12231 + (NN) 4838 + (LL) 1252
1D Compatibility (HY) 400 + (ID) 1100
Total energy: 4969.0 ( 6.16 by residue)
QMean score : 0.148
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