Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELRSGSVGSQAVARRMDGDSRDGGGGKDATGSEDYENLPTSASVSTHMTAGAMAGILEHSVMYPVDSVKTRMQSLSPDPKAQYTSIYGALKKIMRTEGFWRPLRGVNVMIMGAGPAHAMYFACYENMKRTLNDVFHHQGNSHLANGIAGSMATLLHDAVMNPAEVVKQRLQMYNSQHRSAISCIRTVWRTEGLGAFYRSYTTQLTMNIPFQSIHFITYEF---------LQEQVN-----PHRTYNPQSHII-------SGGLAGALAAAATTPLDVCKTLLNTQENVA-LSLANISGRLSGMANAFRTVYQLNGLAGYFKGIQARVIYQMPSTAISWSVYEFFKYFLTKRQLE------NRAPY |
| 4RKS Chain:A ((21-337)) | ---TYRSIGSTA--YPTIGVVLLGGIANPVTRT----PLHTSAGIAYSDSCGSI-----RSETRIYADEATHIYFNGTESTDDNRSVRRVLDRY------------SSVFEEAFGTKTVSYSSQNFGILS---------GSSDAGAASIGAAILGLKPD-LDPHDVENDLRAVSESAGRSLFGGLTITWSDG-----FHAYTEKILDPEAFSGYSIVAFAFDYQRNPSDVIHQNIVRSDLYPARKKHADEHAHMIKEYAKTNDIKGIFDLAQEDTEEYHSILRGVGVNVIRENMQKLISYLKLIRKDYWNAYIVTG------GSNVYVAVESENADRLFSIENTFGS--KKKMLRIVGGAWHRRPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71924 for 2404 contacts (-29.9/contact) +
2D Compatibility (PS) -30761 + (NN) -8440 + (LL) 3796
1D Compatibility (HY) -2400 + (ID) 2650
Total energy: -112379.0 ( -46.75 by residue)
QMean score : 0.134
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