Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTKGGQTWARRALLLGILWATAHLPLSGTSLPQRLPRATGNSTQCVISPSSEFPEGFFTRQERRDGGIIIYFLIIVYMFMAIS---IVCDEYFLPSLEIISESLGLSQDVAGTTFMAAGSSAPELVTAFLGVFITKGDIGISTI--LGSAIYNLLGICAACGLLSNTVSTLS-------------CWPLFRDCAAYTISAAAVLGIIYDNQVYWYEGALLLLIYGLYVLVLCFDIKINQYIIKKCSPCCACLAKAMERSEQQPLMGWEDEGQPFIRRQSRTDS----GIFYEDSGYSQLSISLHGLSQVSEDPPSVFNMPEADLKRIFWVLSLPIITLLFLTTPDCRKKFWKNYF-------VITFFMSAIWISAFTYILV--------WMVTITGETLEIPDTVMGLTLLAAGTSIPDTIASVLVARKGKGD-MAMSNIVGSNVFDMLCLGIPWFIKTAFINGSAPAEVNSRGLTYITISLNISIIFLFLAVHFNGWKLDRKLGIVCLLSYLGLATLSVLYELGIIGNNKIRGCGG |
| 4IKW Chain:A ((3-494)) | --SIDKQQIAA-------------------SVPQR----------GFFGHPKGLFTLFFTEFWERFSYYGMRAILVYYMYYEVSKGGLGLDEHLALAIMSIYGALVYMSGIIGG-WLADRVFGTSRAVFYGGLLIMAGHIALAIPGGVAALFVSMALIVLGTGLLKPNVSSIVGDMYKPGDDRRDAGFSIFYMGINLG-AFLAPLVVGTAGMKYNFHLGFGLAAVGMFLGLVVFVATRKKNL-GLAGTYVPNPLTPAEKKKAAAIMAVGAVVIAVLLAILIPNGWFTVETFISLVGILGIIIPIIYFVVMYRSPKT----TAEERSRVIAYIPLFVASAMFWAIQEQGSTILANYADKRTQLDVAGIHLSPAWFQSLNPLFIIILAPVFAWMWVKLGKRQPTIPQKFALGLLFAGLSFIVILVPGHLSGGGLVHPIWLVLSYFIVVLGELCLSPVGLSATTKL---APAAFSAQTMSLWFLSNAAAQAINAQLVRFYTPE-----NETAYFGTIGGAALVLGLILLAIAPRIGRLMKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -310207 for 3819 contacts (-81.2/contact) +
2D Compatibility (PS) -45394 + (NN) 7634 + (LL) 3208
1D Compatibility (HY) -26000 + (ID) 3900
Total energy: -374659.0 ( -98.10 by residue)
QMean score : 0.127
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