Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MDFLMSGLAACGACVFT----NPLEVVKTRMQLQG----ELQAPGTYQRHYRNVFHAFITIGKVDGLAALQKGLAPALLYQFLMNGIRLGTYGLAEAGGYLHTAEGTHSPARSAAAGAMAGVMGAYLGSPIYMVKTHLQAQAASEIAVGHQYKHQGMFQALTEIGQKHGLVGLWRGALGGLPRVIVGSSTQLCTFSSTKDLLSQWEIFPPQSWKLALVAAMM----SGIAVVLAMAPFDVACTRLYNQPTDAQGKGLMYRGILDALLQTARTEGIFGMYKGIGASYFRLGPHTILSLFFWDQLRSLYYTDTK |
| 1C3Q Chain:A ((13-284)) | MDAQSAAKCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLS-------KESVEAMIIAGKSANEHGVPVILDPVGA-----GATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAITG-----EVDVIADTSHVYTLHNGHKLLTK--VTGAGCLLTSVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQQTADKGPGSFQIELLNKLST--------------------------VTEQDVQEWATIERVTVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218228 for 2234 contacts (-97.7/contact) +
2D Compatibility (PS) -27676 + (NN) -11661 + (LL) 2856
1D Compatibility (HY) 0 + (ID) 1450
Total energy: -256159.0 ( -114.66 by residue)
QMean score : 0.386
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