Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKLLVAKILCMVGVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTDYPLAETILLLGFFMTVFLEQLILTFRKEKPSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQGLSRASPVRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAVHETLVAVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPGSVASVLLQGLAGGTFLFITFLEILAKELEEKSDRLLKVLFLVLGYTVLAGMVFLKW |
2ONK Chain:C ((24-275)) | -MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASD-------------------PAVWKVVLTTYYAALISTLIAVIFGTPLAYILA-----RKSFPGKSVVEGIVDLPVVI------------PHTVAGIALLVVFGSSGLIGSFSPLK--FVDALPGIVVAMLFVSVPIYINQAKEGFAS-----------VDVRLEHVARTLGSSPLRVFFTV-------SLPLSVRHIVAGAIMSWARGISEFGAVVVI-----AYYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ONK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123780 for 1873 contacts (-66.1/contact) +
2D Compatibility (PS) -26249 + (NN) -9784 + (LL) 4000
1D Compatibility (HY) -11200 + (ID) 1650
Total energy: -168663.0 ( -90.05 by residue)
QMean score : 0.262
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