Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMGSPVSHLLAGFCVWVVLGWVGGSVPNLGPAEQEQNHYLAQLFGLYGENGTLTAGGLARLLHSLGLGRVQGLRLGQHGPLTGRAASPAADNSTHRPQNPELSV-DVWAGMPLGPSGWGDLEESKAPHLPRGPAPSGLDLLHRLLLLDHSLADHLNEDCLNGSQLLVNFGLSPAAPLTPRQFALLCPALLYQIDSRVCIGAPAPAPPGDLLSALLQSALAVLLLSLPSPLSLLLLRLLGPRLLRPLLGFLGALAVGTLCGDALLHLLPHAQEGRHAGPGGLPEKDLGPGLSVLGGLFLLFVLENMLGLLRHRGLRPRCCRRKRRNLETRNLDPENGSGMALQPLQAAPEPGAQGQREKNSQHPPALAPPGHQGHSHGHQGGTDITWMVLLGDGLHNLTDGLAIGAAFSDGFSSGLSTTLAVFCHELPHELGDFAMLLQSGLSFRRLLLLSLVSGALGLGGAVLGVGLSLGPVPLTPWVFGVTAGVFLYVALVDMLPALLRPPEPLPTPHVLLQGLGLLLGGGLMLAITLLEERLLPVTTEG |
1MZJ Chain:A ((3-336)) | -----------------------------GLRVPERRFSRVLGVGSYRPRREVSNKEVCTWI----------------------------------------DSTEEWIETRTG-------------------------IRSRRIAEP----------------------------------DETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNF-----VHTPPLSVAIAHELGAD-NAGGFDLSAA-------CAGFCHALSIAADAVESGGSR---------------HVLVVATERMTDVIDLA---------------DRSLSFLFGDGAGAAVVGPS-D--------VPGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGL-TVGDL-VAFVPHQAN-----LRIIDVLVDRLGVPEHVVVS----RDAEDT----GNTSSASVALALDRLVRS-----GAVPGG---GPALMIGFGAGLSYAGQALLLPDPPS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MZJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281952 for 3119 contacts (-90.4/contact) +
2D Compatibility (PS) -35336 + (NN) -10532 + (LL) 7936
1D Compatibility (HY) 1600 + (ID) 2750
Total energy: -321034.0 ( -102.93 by residue)
QMean score : 0.175
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