Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNDPNSCVDNATVCSGASCVVPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFILSVAFDILPLQAVVVLIIGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWVDSGSIVIPYDNIGTSLVSLV-VPVSIGMFVNHKWPQKAKII---LKIGSIAGAILIVLIAVVG---GILYQSAWIIAPKLWIIGTIFPVAGYSLGFLLARIAGLPWYRCRTVAFETGMQNTQLCSTIVQLSFTPEELNVVFTFPLIYSIFQLAFAAIFLGFYVAYKKCHGKNKAEIPESKENGTEPESSFYKANGGFQPDEK |
3ZUX Chain:A ((48-271)) | ----------------------------------------LLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLE-----IQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVA-AIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGI----GYLLGFFAAKWTGLPYDAQKALTIEVGMQNSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZUX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200481 for 1738 contacts (-115.4/contact) +
2D Compatibility (PS) -21547 + (NN) 1164 + (LL) 6508
1D Compatibility (HY) -27600 + (ID) 3850
Total energy: -245806.0 ( -141.43 by residue)
QMean score : 0.223
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