Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGTETRQRRLDSCGKPGELGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLETEPSRETTWSIGLQVTVPFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVPPLVGLKGNLEMTLASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVAKVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLI-----------------TLSILALVSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIV------KILKFGWF--PIILAMVISSFGGLILSKTVSKQQYKGMAIFT--PVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPNPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVTILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGSSSVGHTAAVPRRCTASPGWGLIQPFICTQHLIVSLLSFYFPFCLLAKTSI |
| 4ZOW Chain:A ((98-311)) | --------------------------------------------------------------------------------------------------------------------------------------------------------QFTLLRFLQGISLCFIGAVGYAAIRESFEEAVCIK--ITALMANVALIAPLLGPLVGAAWIHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEKLSLKELGRDYKLVLKNGRFVAGALALGFVSL-PLLAWIA-QSPIIIITGEQLSSYEYGLLQVPIFGALIA---GNLLLARLTSRRTVRSLIIMGGWPIMIGL---LVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLMVIFLK------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86805 for 989 contacts (-87.8/contact) +
2D Compatibility (PS) -19596 + (NN) -9911 + (LL) 15916
1D Compatibility (HY) -18000 + (ID) 2550
Total energy: -120946.0 ( -122.29 by residue)
QMean score : 0.006
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