Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVISTINQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFENGQRAFVIFNEL---EQPVNGYDYNIQVRDITKVLTKEIVTMDDEENTEEKIGDDKINA--TYMWISKDKKYLTIEFQYYSTHSEDKKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDHLGEGYVSFKLDKIEEQIEGKKGLNIRVRTLYDGIKNYKVQFP |
3K0Y Chain:A ((10-178)) | ----------------------------------DIWIAVATVVPEGNNVYYLRLDDGDKLWPAATNYPNYQPKPN-QRALVNFTILADS--------HYIKVNAIHNILTKSIAKNEGAAN-DSIYGTDPVSIYNNNMWIGD--GYLNIYFE--TLWGGKTAHFINLI----QPD--AENDPYT------LEFRHNAYDDPQYTIGAGRVAFNLSSLPD--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K0Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16996 for 1071 contacts (-15.9/contact) +
2D Compatibility (PS) -16422 + (NN) -4240 + (LL) 5256
1D Compatibility (HY) -12400 + (ID) 2600
Total energy: -47402.0 ( -44.26 by residue)
QMean score : 0.211
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