Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIMKKKILAYALSALTCGLFTSCSDWLDINHDPNTAEKVDPGYLFNYVAVNWAGTRTGGDFYIPLSMSSQCQVDGGLDYGGWDESVYTISPYSTGNTWKHYYSVGGNNLMLAIKNAEEA-DPVNHNAIAQCKILLAEHMYEATMLWGDIPFTESWNGTIK---YPKFDSQESVLNGVLSLLDEALQIMDLNDANAIDEYDIYYKGDMNKWMTLAKSLKFRTLMVMVDK----DPSKATAIGTLLQAGGMVSSASDNLVFPYSAEPGNQNPKYELIELVGGTQILFFASNYMLKPMQERNDPRIPCYF--EPGADGVYRGLGN------REPAV----TDDK---DNMLSSVVSSYLFRKDAPELIYSCQEQLLLEAEAYARGLGVAQNLSKANELYKKGIREACAFYGVAEADIDTYVTGLPELTALTQEKALYEIHMQQWIDLMDRPFEEFVQWRRSGTAGNEVPTLQVPEDATSKELIRRWEYSPEEMTANINAPKESPKIWEKLWFDL |
| 4LER Chain:A ((13-379)) | --------------------------------------TNPSLLLTGVAYS-AFNQTSSD---------ACHAAKMLILTS-GESKYQVYKWTRGDF--DYYS----NLRDVTKMSEEAGEGSAYQALAH--FFRANYFYQLTLDFGSIPYTDALKAETDANYQPAYDSQEVVLAGILKELEEADKMLEGSD--EIISGDIIYNGNLVNWRKLINAYRLRILMSLSGKEKVGDIDVKSEFSKIVADGPLMESLSDNGQLIYLDQQDNRYPYFNDSDFGSGR---FMDSTYIAE-LATRQDPRLFAVATQTPNAEKAGKAINDFSSYDGGDPAVPYSLVNDKAVAGNCSKPAPRYYQTPTNEPMVLLGYVEQQLILAEAVVRGW--IQGDDKI--YYESAVKASFEFYQKYAVSVADYLTQDAAAEYLRNDKVAY----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96507 for 2685 contacts (-35.9/contact) +
2D Compatibility (PS) -36595 + (NN) -13417 + (LL) 9964
1D Compatibility (HY) -17200 + (ID) 5000
Total energy: -158755.0 ( -59.13 by residue)
QMean score : 0.242
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