Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLLLITLLIGYIYPCVAQDKPIRTEESLEGTVIYKKTTTFEVDGYTYQCDVDDGSQFVTLYNKENKLTYEKIVYKDTGKTYIGSWSSNVIEYD--RFMSQQADFIVDQAFTKAMADEIGKTELMITMLLSPNTGEVMEVNFNFFTFEPYAKVPLHVYREIEVKLKEQIHFKPIEEGKQLNYIMLAWMQKPQGKLPPLPPPGSLM |
3F81 Chain:A ((53-113)) | ---------------------------------------------GITHVLNAAEGRSFMHVNTNAN-------FYKDSGITYLGIKANDTQEFNLSAYFERAADFI-DQALAQ-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F81.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5001 for 310 contacts (16.1/contact) +
2D Compatibility (PS) -6294 + (NN) -1734 + (LL) 11700
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: 4073.0 ( 13.14 by residue)
QMean score : 0.079
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