Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKRLLTVAAFALAGCVTVVAQDKKKEFKMPTGYAGITHEMSEFYEPVPPVVTPGTDLKGGGFTAPSDA---IVLFDGKDLSAWESVKGGA--AEWDVHDGVFTVNKKKG---------DIQTKQKFNDFQMHIEWQVPTNITGESQSRGNSGIF----------------LQGMY----EVQVLDCYNNPTYV-----NGQTGSIYKQSIPLANAMRKP-GEWNVYDI-IYTAPTFKEDGSYRTHPTVTVIQNGV-VLQNHTTILGTTEWIGFPQVKK-------------------HGAGPIILQSHGDPSEPISFRNIWIREL |
| 3OSD Chain:A ((32-264)) | -----------------------------------------------------------------PVDADGYITIFDGKTFNGWRGYGKDRVPSKWTIEDGCIKFNGSGGGEAQDGDGGDLIFAHKFKNFELEMEWKVSKG--------GNSGIFYLAQEVTSKDKDGNDVLEPIYISAPEYQVLDNDNHPDAKLGKDNNRQSASLY-DMIPAVPQNAKPFGEWNKAKIMVYKG-------------TVVHGQNDENVLEYH---LWTKQWTDLLQASKFSQDKWPLAFELLNNCGGENHEGFIGMQDHGD---DVWFRNIRVKVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OSD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73727 for 1261 contacts (-58.5/contact) +
2D Compatibility (PS) -18471 + (NN) -1294 + (LL) 4660
1D Compatibility (HY) -12000 + (ID) 3650
Total energy: -104482.0 ( -82.86 by residue)
QMean score : 0.251
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