Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | QDTFIAAVYEHAAILPNATLTPVSREEALALM-----------NRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLF------------MGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAVTLV-KDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVNFLASN----------IHYPSKKMTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYAS-SIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALGAFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVLLSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSG |
| 1FO6 Chain:A ((3-304)) | ------------------------RQMILAVGQQGPIARAETREQVVGRLLDMLTNAASRGVNFIVFPELALTTF-FPRWHFTDEAELDSFYETEM----------PGPVVRPLFETAAELGIGFNLGYAELVVEG--------GVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDVDAAKMGMFICNDRRWPETWRVMGLKGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKVGMEEGCMLLGHSCIVAPTGE--IVALTTTLEDEVITAALDLDRCRELREHIFNFKAHRQPQHYGLIAEF-------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78324 for 2104 contacts (-37.2/contact) +
2D Compatibility (PS) -28440 + (NN) -12055 + (LL) 10968
1D Compatibility (HY) -2400 + (ID) 2550
Total energy: -112801.0 ( -53.61 by residue)
QMean score : 0.123
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