Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GEGVSYSDGHFLTKSGGVINFRKTRVTSITITILGNYGLRVVNGELQNTPLTFKGA-DFKSSTLKDELLIPLEGAVQLNTAPSTALCIFITTDHVYRELCMMQFLTDVDKTPFLVVLRSESKHETIQYMHIVTVHPFLSLTA
3M5U Chain:A ((153-213))
------------------------------------YGTQYQNYPKTKTPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLER---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3M5U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14329 for 322 contacts (-44.5/contact) +
2D Compatibility (PS) -6226 + (NN) 753 + (LL) 5848
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -17354.0 ( -53.89 by residue)
QMean score : 0.043
(partial model without unconserved sides chains):
PDB file :
Tito_3M5U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M5U-query.scw
PDB file :
Tito_Scwrl_3M5U.pdb
: