Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKKTVRFGEQAAVPAIGLGTWYMGEHA--AQRQQEVAA--LRAGIDHGLTVIDTAEMYADGGAEEVVGQAIRGL-RDRVVLVSKV--------YPWHAGKAAMHRACENSLRRLQTDYLDMYLLHWRGD-IPLQETVEAMEKLVAEGKIRRWGVSNLDIEDMQALWRTADGEHCATNQVLYHLASRGIEYDLLPWCQQHSLPVMAYCPLAQ---AGR-LRDGLFQHSDIIN----------------------MANARGITVAQLLLAWVIRHPGV-LAIPKAASIEHVVQNAAALDIVLSGEELAQLDRLYPPPQRKNRLDMV |
1PZ0 Chain:A ((13-311)) | -------------VFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANK--DG-LVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQEDISFIDKLFAP---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179414 for 2048 contacts (-87.6/contact) +
2D Compatibility (PS) -28307 + (NN) -15449 + (LL) 2308
1D Compatibility (HY) -21200 + (ID) 4100
Total energy: -246162.0 ( -120.20 by residue)
QMean score : 0.465
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