Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AARYDDVLYFPASRYPETGAHISDAIKAGHADVCTIERSGADKRRQESLKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLN---GYADGTRILFIVQ
4B6M Chain:A ((13-52))
------------------------------------------------------------------LCRPGDRLGSVRFVGRVASLKPGYWVGVEFDEPVGKGDGT-------
General information:
TITO was launched using:
RESULT:
Template:
4B6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2188 for 150 contacts (14.6/contact) +
2D Compatibility (PS) -4058 + (NN) -2729 + (LL) 4368
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -3731.0 ( -24.87 by residue)
QMean score : 0.066
(partial model without unconserved sides chains):
PDB file :
Tito_4B6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B6M-query.scw
PDB file :
Tito_Scwrl_4B6M.pdb
: