Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEAALTPAFEEPEAPRASPRSRSTLLKRLADVVCLPSSRINAFERSMTADLLVEMLRDANVGEREKVARRLAMLNEMPGVLVRLLLRDELPVARALLVDSEKLSDADLISCLYQATTEHRRLIAQRRGVSEVVADALIEVGEPAVIETLLRNELVKLSHQGVENIVAATRDAQHLIPLLLRRAELRPSHAYVMFWWADSEARRVILQRFAVSREILQDAVGDVFALASAEGWQDPLSRKALQFIERRQRNRAAIAKSPFNSLDEAVAAGEGGFNREIAEEISYLSGLKPM---TGAKIFTD-------PGGEPLAILCKATGLPRGCVRQLWRGLRRQEVDRTGATDPNLERVLTVYDAIAVDRAQTVLRYWNWSLTSALTPALLKAIRDGDEAAVDEYSAPQRAAMLALSRDFGR |
| 4KWI Chain:A ((27-103)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIGRAIAEKLGYAGALVAVHYATGADAAAEVAESIEKDGGRAFTVKAE-LGVP-GDVDVLFEGLERGLKERTGATDLDI------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KWI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4843 for 365 contacts (-13.3/contact) +
2D Compatibility (PS) -7566 + (NN) -3962 + (LL) 29828
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: 9357.0 ( 25.64 by residue)
QMean score : 0.035
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