Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHHHHHHLIPAEQLPPLKEEEVIEKIENDACIQKSLEKIRALSKLIYNNPEIL--EQDISHINANPKMGRELSERIINSPKSIGRLKGRKIGYIKSQKYKISEQNAKILSNEIFNYADKVSNIRCTIMREHKAKGRRLLQTVKMPS
3MBE Chain:B ((11-65))
--------------------RHFVHQFKGECYFTNGTQRIRLVTRYIYNREEYLRFDSDVGEYRAVTELGRHSAE------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3MBE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2813 for 269 contacts (-10.5/contact) +
2D Compatibility (PS) -5494 + (NN) 617 + (LL) 6488
1D Compatibility (HY) -5200 + (ID) 600
Total energy: -7002.0 ( -26.03 by residue)
QMean score : -0.020
(partial model without unconserved sides chains):
PDB file :
Tito_3MBE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MBE-query.scw
PDB file :
Tito_Scwrl_3MBE.pdb
: