Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | SNAMPFLPDPGEPSPLKVV-IAGAGYVGTCLAVTLAGR--GAEVVAVDSDPGT----VADLRAGRCRLP--EPGLAGAVRDLAATGRLTASTSYDPVGAADVVIVTVGTPTDAGHEMVTD--QLVAACEQIAPRLRAGQLVILKSTVSPGTTRTLVAPLLES-GGLVHERDFGLAFCPERLAEGVALAQVRTLPVVVGGCGPRSAAAAERFWRSALGVDVRQVPSAESAEVVKLATNWWIDANVAIANELARYCAVLGVDVLDVIGAANTLPKGSSMVN-LLLPGVGVGGSCLTKDPWMAWRDGRDRGVPLRTVE------------TARAVNDDMPRHTAAVIADELVKLGRDRNDTTIAVLGAAFKNDTGDVRNTPVRGVVAALRDSGFRVRIFDPLADPAEIVARFGTAPAASLDEAVSGAGCLAFLAGHRQFHEL--DFGALAERVDEPCLVFDGRMHLPPARIRELHRFGFAYRGIGR |
| 3G79 Chain:A ((14-470)) | -----------ERGPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKAGEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFRDLQIAAINQLALYCEAMGINVYDVRTGVDSL-KGEGITRAVLWPGAGVGGHCLTKDTYHL-----ERGVKIGRGELDYPEGADSIYVLARKVNDFMPAHMYNLTVAALERLGKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPY-----VVNYPGVEISDNLEEVVRNADAIVVLAGHSAYSSLKADWAKKVSAKANPVII-DGRNVIEP---DEFIGKGFVYKGIGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -286334 for 3624 contacts (-79.0/contact) +
2D Compatibility (PS) -47504 + (NN) -27168 + (LL) 608
1D Compatibility (HY) -25200 + (ID) 7350
Total energy: -392948.0 ( -108.43 by residue)
QMean score : 0.405
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