Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSSHHHHHHSSGPQQGLRSNSDDAEKPVVPVPTGDVAIYTTTSSLTRDLTRDAVNFSPKDNLAPTTITLNPAEQYQTMDGFGAAITGSTCYNLLLMKPADRHAFLTETFSDKDGFGFSYIRISIGCSDFSLSEYTCCDTKG---IENFALQSEEKDYILPILKEILAI-NPSIKVIAAPWTCPKWMKVKSLTDRTPLDSWTNGQLNPDYYQDYATYFVKWIQAFKAEGIDIYAVTPQNEP----LNRGNSASLYMEWEEQRDFVKTALGPQMKAAGLSTKIYAFDHNYNYDNIESQK----NYPGKIYEDAAASQYLAGAAYHNY----GGNREELLNIHQAYPEKELLFTETSI-----------GTWNSGRDLSKRLMEDMEEVALGTINNWCKGVIVWNLMLDNDRGPNREGGCQTCYGAVDINNSDYKTIIRNSHYYIIAHLSSVVKPGAVRIATTGYTDNGITCSAFENTDGTYAFVLINNNEKSKKITVSDGQRHFAYDV-PGKSVTSYRWAKSK |
| 2V3F Chain:A ((69-498)) | -------------------------------------------------------------------LTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSE-EGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNG---KGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANST--------HHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNL----LYHVVGWTD----WNLALNPEGGPNWVRNFVDSPIIVDITKD---TFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168923 for 3471 contacts (-48.7/contact) +
2D Compatibility (PS) -43346 + (NN) -16706 + (LL) 3916
1D Compatibility (HY) -32400 + (ID) 5850
Total energy: -263309.0 ( -75.86 by residue)
QMean score : 0.347
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