Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGHTQQPSGRGNPRPAPSPSPVPGTVPGASERVALKKEIGLLSACTIIIGNIIGSGIFISPKGVLEHSGSVGLALFVWVLGGGVTALGSLCYAELGVAIPKSGGDYAYVTEIFGG--LAGFL--LLWSAVLIMYPTSLAVISMTFSNYVLQPVFPNCIPPTTASRVLSMACLMLLTWVNSSSVRWATRIQDMFTGGKLLALSLIIGVGLLQIFQGH-FEELRPSNAFAFWMTPSVGHLALAFLQGSFAFSGWNFLNYVTEEMVDARKNLPRAIFISIPLVTFVYTFTNIAYFTAMSPQELL--SSNAVAVTFGEKLLGYFSWVM-PVSVALSTFGGINGYLFTYSRLCFSGAREGHLPSLLAMIHVRHCTPIPALLVCCGATAVIMLVGDTYTLINYVSFINYLCYGVTILGLLLLRWRRPALHRPIKVNLLIPVAYLVFWAFLLVFSFISEPMVCGVGVIIILTGVPIFFLGVFWRSKPKCVHRLTESMTHWGQELCFVVYPQDAPEEEENGPCPPSLLPATDKPSKPQ |
3GI8 Chain:C ((5-312)) | ------------------------------------NKKLSLWEAVSMAVGVMIGASIF-SIFGVGAKIAGRNLPE-TFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNIITGALSILLWMS----YVISIALFAKGFAGYFLPLI--NAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVALLILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLS---------YMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVA-AKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKS---------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GI8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -206009 for 2512 contacts (-82.0/contact) +
2D Compatibility (PS) -30386 + (NN) 1939 + (LL) 6132
1D Compatibility (HY) -28000 + (ID) 4150
Total energy: -260474.0 ( -103.69 by residue)
QMean score : 0.238
|
|
|