Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAAEARVSRWYFGGLASCGAA-----CCTHPLDLLKVHLQT---QQEVKLRMTGMA---LRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKV------LLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRN----YAHALDGLYRVAREEGLRRLFSGATMASSR---GALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMNSKGEYQGVFHCAVETAKLGPLAFYKGLVPAGIRLIPHTVLTFVFLEQLRKNFGIKVPS |
2C3E Chain:A ((110-293)) | --------RYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDT--------AKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRM-----MMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLV----LYDEI------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2C3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -46871 for 990 contacts (-47.3/contact) +
2D Compatibility (PS) -16178 + (NN) 1052 + (LL) 9184
1D Compatibility (HY) -9600 + (ID) 2650
Total energy: -65063.0 ( -65.72 by residue)
QMean score : 0.181
|
|
|