Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQEPLLGAEGPDYDTFPEKPPPSPGDRARVGTLQNKRVFLATFAAVLGNFSFGYALVYTSPVIPALERSLDPDLHLTKSQA-SWFGSVFT---LGAAAGGLSAMILNDLLGRKLSIMFSAVPSAAGYALMAGAHGLW-----------------------MLLLGRTLTGFAGGLTAACIPVYVSEIAPPGVRGALGATPQLMAVFGSLSLYALGLLLP------------WRWLAVAGEAPVLIMILLLSFMPNSPRFLLSRGRDEEALRALAWLRGTDVDVH--WEFEQIQDNVRRQSSRVSWAEARAPHVCRPITVALLMRLLQQLTGITPILVYLQSIFDSTAVLLPPKDDAA-----IVGAVRLLSVLIAALTMDLAGRKVLLFVSAAIMFAANLTLGLYIHFGPRPLSPNSTAGLESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGYAVGWGPITWLLMSEVLPLRARGVASGLCVLASWLTAFVLTKSFLPV------VSTFGLQVPFFFFAAICLVSLVFTGCCVPETKGRSLEQIESFFRTGRRSFLR |
| 4JA4 Chain:A ((9-479)) | ------------------------------------YIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAV-----LFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLM----QEQAEGILRKIMGNTLATQAVQEIKHSLDHG--------MFGVGV------IVIGVMLSIFQQFVGINVVLYYAPEV---------------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFY-------------------------TQAPG----IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTF-PMMDKNSW-----NGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -370213 for 3255 contacts (-113.7/contact) +
2D Compatibility (PS) -41417 + (NN) -26159 + (LL) 2896
1D Compatibility (HY) -38800 + (ID) 5700
Total energy: -479393.0 ( -147.28 by residue)
QMean score : 0.381
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